1.Lu J.Y.#, Chang L#, Li T#,…, Sun Y*, Shen X*. Homotypic clustering of L1 and B1/Alu repeats compartmentalizes the 3D genome. (* co-corresponding). Cell Research. 2021.
2.Yin Y*, Lu JY, …, Zhang Q, Shen X*. (2020) U1 snRNP regulates chromatin retention of noncoding RNAs. Nature. 580(7801):147-150. (* co-corresponding)
3.Lu JY, Shao W, Chang L, …, Sun Y, Shen X. (2020) Genomic repeats categorize genes with distinct functions for orchestrated regulation. Cell Reports. 30(10):3296-3311.
4.Han X, Zhang J, Liu Y, …, Tang F, He A*, Shen X*. (2019). The lncRNA Hand2os1/Uph locus orchestrates heart development through regulation of precise expression HAND2. Development. Accepted. (* co-corresponding)
5.Bi X, Xu Y, …, Li P, Shen X. (2019). RNA targets ribosome biogenesis factor WDR43 to chromatin for transcription and pluripotency control. Mol Cell.
6.Luo S, Lu J, Liu L, Yin Y, …, Zhang Y.E. and Shen X. (2016). Divergent lncRNAs regulate gene expression and lineage differentiation in pluripotent cells. Cell Stem Cell. 18(5):637-52.
7.Yin Y, Yan P, Lu J, …, Orkin SH, Shen X. (2015). Opposing roles for the lncRNA Haunt and its genomic locus in regulating HOXA gene activation during embryonic stem cell differentiation. Cell Stem Cell. 16(5):504-16.